Kian Eichholz, B.Eng DEVELOPMENT OF MECHANOBIOMIMETIC STRATEGIES TO DRIVE STEM CELL BEHAVIOUR FOR BONE REGENERATION Trinity College Dublin, January 2019 A thesis submitted to the University of Dublin in partial fulfilment of the requirements for the degree of Doctor of Philosophy Supervisor: Prof. David Hoey Internal Examiner: Prof. Daniel Kelly External Examiner: Prof. Paul Dalton I Declaration I declare that this thesis has not been submitted as an exercise for a degree at this or any other university and it is entirely my own work. I agree to deposit this thesis in the University’s open access institutional repository or allow the library to do so on my behalf, subject to Irish Copyright Legislation and Trinity College Library conditions of use and acknowledgement. ______________________ Kian Eichholz II Summary There are a host of cases where clinical intervention must be taken to treat diseased or damaged bone, including severe fractures, defects, tumours requiring tissue removal, and debilitating diseases such as osteoporosis. However, there are no current treatments which adequately achieve this goal, with current autografting approaches having severe limitations in terms of quantity of tissue available and additional surgical sites which damage healthy tissue and increase infection risk. There is thus a need to develop new strategies for bone regeneration. Understanding the mechanisms behind bone regeneration, and in particular, the key role of the mesenchymal stem cell (MSC) in this process, would provide invaluable information for the development of strategies to effectively regenerate bone in a physiologically appropriate manner. The overall aim of this thesis was to investigate the biophysical cues within the stem cell niche in bone which drive the recruitment and osteogenesis of MSCs, with the aim of developing strategies to recapitulate this behaviour and guide bone repair. The two primary means by which MSC behaviour is mediated were investigated in this thesis: indirect biophysical cues from osteocytes (stream 1 – chapter 3), and direct biophysical cues from the underlying fibrous tissue (stream 2 – chapter 4-6), which were subsequently combined to create a mechano-biomimetic scaffold for bone regeneration (chapter 7). In this thesis, the indirect biophysical cues from osteocyte signalling to MSCs were first investigated (chapter 3), where osteocytes were shown to release distinct mechanically activated osteocyte-derived extracellular vesicles (MAEVs) which contained unique cargo compared to extracellular vesicles (EVs) from statically cultured cells. These MAEVs significantly enhanced MSC recruitment and osteogenesis, with trends being almost identical to MSCs treated with conditioned medium from mechanically stimulated osteocytes. This confirmed that EVs are a key component in osteocyte-MSC III mechanosignaling, and reveals their potential alone for use as mechanotherapeutics to guide regeneration. Next, the role of direct biophysical cues in mediating MSC behaviour was investigated. To facilitate this, a melt electrowriting (MEW) printer was designed and built (chapter 4) to facilitate the fabrication of defined fibrous microenvironments upon which to study MSC behaviour. Various architectures with 10 μm fibre diameter were fabricated, where it was demonstrated that a 90° architecture enhanced MSC spreading and Yes- associated protein (YAP) nuclear expression, a marker for osteogenesis (chapter 5). Long term culture of MSCs further revealed enhanced osteogenic differentiation in this scaffold architecture. The role of mineral modifications in driving MSC osteogenesis was further investigated (chapter 6). A biomimetic nano-needle hydroxyapatite (nnHA) coating was developed, characterised and compared to other mineral modification methods, including a commonly used coating method which yields a micro-plate hydroxyapatite (pHA) morphology, and a composite polycaprolactone-hydroxyapatite material to fabricate fibres with incorporated mineral. The nnHA coating significantly enhanced MSC mineralisation compared to all other groups and was also shown to facilitate a more controlled release of BMP2, demonstrating its potential for use in applications requiring controlled drug release. Finally, stream 1 and 2 were combined, with MAEVs being used for the functionalisation of nnHA scaffolds (chapter 7). The addition of MAEVS further significantly enhanced mineralisation almost 2-fold, in addition to a total 24-fold compared to the 90° scaffold developed in chapter 4 and a total of 52-fold compared to random fibrous scaffolds. This biomimetic scaffold which incorporates both direct and indirect biophysical cues inspired by the native stem cell niche in bone thus holds great potential as a more physiologically relevant and effective strategy to guide bone regeneration. IV Acknowledgements Undertaking this project over the past number of years has been a tough, but rewarding journey. I have been extremely lucky to have enormous support from mentors, family and friends, and have been lucky enough to meet a lot of new people along the way which have also become lifelong friends. Without all of this support, none of this work would have been possible. First and foremost, I would like to express my greatest thanks to Prof. David Hoey, and state that I genuinely could not have asked for a better supervisor. Dave has been a truly exceptional mentor, and I couldn’t have done this work to anywhere near this standard without his help. Most importantly, his endless friendly support has made this project a joy to do. I have learned a lot from Dave over these past few years and will always be grateful to him for giving me this opportunity. I was extremely lucky to work with a lot of great people throughout this PhD who have become great friends. To my original lab family; Jilly, Marie, Elena and Michele, who taught me from the level of not knowing what a pipette was, and Mathieu (Team Actimel), Ian, Angelica, Dan, Cairnan, Nian, Ivor and Conor, all of whom have helped me countless times throughout this project. I would also like to thank Kieran, Olwyn, Pedro, Paola, Pierluca, Fiona, Stan, Dinorath and Peter for their help and wisdom with various aspects of this project. Thanks also to Jess, Grá, Ian, Simon, Andy, Dave and Ross, my housemates Jenny, Julia and Stefan, and everyone else outside of my research group including those in my office in Parsons and everyone in TCBE, who have also helped along the way and made this journey much more fun than I thought possible. To some of my great and long-time friends, Killian, Kieron, Daniel, Darragh, Luke, Johnny, Billy, JP and Patrick. There’s been many times where things have gotten in the V way and we haven’t seen each other for long periods of time, but when we do it’s as if nothing has changed at all. So thank you all for always being there throughout the years. I would like to express my deepest thanks to my family; my parents Libby and Jörg, and my sisters Orlagh and Ciara. I’m sure I haven’t said this as much as I should, but I can’t thank you all enough for the continuous and endless support you have given me throughout my life, without which I would not be where I am today. I would also like to say a huge thank you to mam in particular, for all your help and time spent reading over this thesis. I am also very lucky to have a close and hugely supportive extended family. I would like to say a special thanks to my grandmother Betty and late grandfather James, who believed my mind for engineering came from him. To my extended family in Ireland and all over the world for your great support over the years; my Opa Jochen, late Oma Marlies, my aunts and uncles Mary, Gerry, Nicky, Seamie, Martin, Michael, Rita, Teresa, Tommy and Silke, and all of my close cousins of which there are too many to name here. Last but not least, I’d like to say a huge thank you to Sayuri, who has always given me tremendous support and has constantly been there for me throughout all the good times and the bad. I can’t imagine how difficult this would have been without you, and feel extremely lucky to always have you by my side. Thank you all. VI Table of Contents Declaration ............................................................................................................................. I Summary .............................................................................................................................. II Acknowledgements ............................................................................................................ IV Table of Contents ............................................................................................................... VI Publications ........................................................................................................................ XI Book chapters ..................................................................................................................... XI Conference abstracts ........................................................................................................ XII Nomenclature .................................................................................................................. XIV Chapter 1 Introduction ......................................................................................................... 1 1.1 The need for new strategies to regenerate tissue ........................................................... 1 1.2 Mechanobiological cues driving tissue regeneration .................................................... 2 1.3 MEW as a means to control the tissue microenvironment ............................................ 5 1.4 Objectives of thesis ....................................................................................................... 6 Chapter 2 Literature review .............................................................................................. 11 2.1 Introduction ................................................................................................................. 11 2.2 Bone Anatomy ............................................................................................................ 12 2.2.1 Cell types ........................................................................................................................ 12 2.2.2 Development and healing ................................................................................................ 15 2.2.3 Hierarchical structure and composition .......................................................................... 19 2.3 Bone mechanobiology ................................................................................................. 24 2.3.1 Introduction ..................................................................................................................... 24 2.3.2 Role of the osteocyte in mechanoadaptation ................................................................... 24 2.3.3 Osteocyte mechanosignalling ......................................................................................... 26 2.4 Role of EVs in cell signalling ..................................................................................... 29 2.4.1 Introduction ..................................................................................................................... 29 2.4.2 EVs in bone ..................................................................................................................... 31 2.5 Direct biophysical regulation of MSCs ....................................................................... 34 2.5.1 Introduction ..................................................................................................................... 34 2.5.2 Role of architecture in mediating MSC mechanobiology ............................................... 37 2.6 Controlling architecture for bone regeneration ........................................................... 44 2.6.1 Fibre architecture ............................................................................................................ 44 2.6.2 Mineral architecture ........................................................................................................ 47 2.7 MEW ........................................................................................................................... 50 2.7.1 Introduction ..................................................................................................................... 50 2.7.2 Development of MEW technology ................................................................................. 52 2.7.3 Applications of MEW in regenerative medicine ............................................................. 58 VII 2.8 Summary ..................................................................................................................... 64 Chapter 3 Osteocytes regulate human bone marrow mesenchymal stem cell behaviour via mechanically activated osteocyte-derived extracellular vesicles (MAEVs) ............. 67 3.1 Introduction ................................................................................................................ 67 3.2 Materials and methods ................................................................................................ 71 3.2.1 Cell culture ...................................................................................................................... 71 3.2.2 Mechanical stimulation and conditioned medium collection .......................................... 71 3.2.3 Effect of osteocyte conditioned media on hMSC recruitment ......................................... 72 3.2.4 Effect of osteocyte conditioned media on hMSC osteogenesis ....................................... 72 3.2.5 Sample preparation for mass spectrometric (MS) analysis .............................................. 73 3.2.6 Liquid chromatography tandem mass spectrometry (LC MS/MS) .................................. 73 3.2.7 MS data analysis .............................................................................................................. 74 3.2.8 Bioinformatics and statistical analyses ............................................................................ 74 3.2.9 Extracellular vesicle isolation from conditioned media ................................................... 75 3.2.10 Characterisation of EVs ................................................................................................... 76 3.2.10.1 TEM imaging ........................................................................................................ 76 3.2.10.2 Immunoblotting ..................................................................................................... 76 3.2.10.3 Quantification of EV content in conditioned medium ........................................... 76 3.2.10.4 Particle size analysis .............................................................................................. 77 3.2.11 Uptake of EVs by MSCs .................................................................................................. 77 3.3 Results ........................................................................................................................ 78 3.3.1 Osteocytes regulate human MSC recruitment and osteogenesis in response to fluid shear 78 3.3.2 Overview of identified proteins within the osteocyte sectretome .................................... 79 3.3.3 Proteomic analysis of the osteocyte secretome reveals enrichment of proteins associated with EVs ..................................................................................................................................... 80 3.3.4 Mechanical stimulation alters the protein release characteristics in osteocytes............... 83 3.3.5 EVs are present within the osteocyte secretome and EV morphology and size distribution is not altered by mechanical stimulation ................................................................. 87 3.3.6 Osteocytes regulate human MSC recruitment and osteogenesis in response to fluid flow shear via MAEVs ....................................................................................................................... 88 3.4 Discussion ................................................................................................................... 90 3.5 Conclusion .................................................................................................................. 96 Chapter 4 Design and build of a melt electrowriting printer ......................................... 99 4.1 Introduction ................................................................................................................ 99 4.2 Materials and methods .............................................................................................. 101 4.2.1 Transient heat transfer analysis...................................................................................... 101 4.2.2 Heating-voltage assembly .............................................................................................. 106 4.2.3 Polymer extrusion .......................................................................................................... 108 4.2.4 Controlled deposition..................................................................................................... 109 4.2.5 Enclosure and safety ...................................................................................................... 110 VIII 4.2.6 Process visualisation and monitoring ............................................................................ 111 4.3 Results ....................................................................................................................... 111 4.3.1 Completed MEW printer ............................................................................................... 111 4.3.2 Characteristics of heating assembly .............................................................................. 112 4.3.3 Extrusion characteristics of syringe pump and pressure driven systems ...................... 114 4.3.4 Control of fibre deposition ............................................................................................ 116 4.3.5 Scaffold fabrication ....................................................................................................... 118 4.4 Discussion ................................................................................................................. 120 4.5 Conclusion ................................................................................................................ 123 Chapter 5 Mediating human stem cell behaviour via defined fibrous architectures by melt electrowriting ............................................................................................................ 125 5.1 Introduction ............................................................................................................... 125 5.2 Materials and methods .............................................................................................. 128 5.2.1 Scaffold fabrication and characterisation ...................................................................... 128 5.2.2 Mechanical characterisation of scaffolds ...................................................................... 129 5.2.3 Cell culture and proliferation ........................................................................................ 130 5.2.4 Immunofluorescence and YAP expression ................................................................... 131 5.2.5 Characterisation of osteogenic differentiation .............................................................. 132 5.2.5.1 Intracellular ALP ................................................................................................ 132 5.2.5.2 Collagen production ........................................................................................... 132 5.2.5.3 Mineral production ............................................................................................. 133 5.2.6 Statistical analysis ......................................................................................................... 133 5.3 Results ....................................................................................................................... 134 5.3.1 Fibrous cellular micro-environment design and imaging ............................................. 134 5.3.2 Mechanical characterisation of fibrous cellular micro-environments ........................... 135 5.3.3 Attachment and proliferation of human MSCs ............................................................. 137 5.3.4 Fibrous architecture mediates stem cell shape and mechano-signalling ....................... 138 5.3.5 Fibrous architecture directs human stem cell osteogenesis ........................................... 140 5.3.5.1 ALP activity ........................................................................................................ 140 5.3.5.2 Collagen production ........................................................................................... 141 5.3.5.3 Mineral production ............................................................................................. 142 5.4 Discussion ................................................................................................................. 143 5.5 Conclusion ................................................................................................................ 146 Chapter 6 Melt electrospun written scaffolds with tailored fibrous and mineral architectures to enhance protein delivery and human MSC osteogenesis for bone regeneration ....................................................................................................................... 149 6.1 Introduction ............................................................................................................... 149 6.2 Materials and methods .............................................................................................. 154 6.2.1 Scaffold fabrication ....................................................................................................... 154 6.2.1.1 MEW of PCL ...................................................................................................... 154 6.2.1.2 pHA coating ........................................................................................................ 154 IX 6.2.1.3 Nano-needle hydroxyapatite (nnHA) coating ..................................................... 155 6.2.1.4 Hydroxyapatite incorporated (iHA) PCL MEW ................................................. 156 6.2.2 Scaffold characterisation ............................................................................................... 156 6.2.2.1 SEM imaging and Energy-dispersive X-ray spectroscopy .................................. 156 6.2.2.2 X-ray diffraction .................................................................................................. 157 6.2.2.3 Calcium staining .................................................................................................. 157 6.2.2.4 Water contact angle ............................................................................................. 158 6.2.2.5 Tensile testing ..................................................................................................... 158 6.2.3 hMSC Cell culture ......................................................................................................... 158 6.2.4 Proliferation ................................................................................................................... 159 6.2.5 Characterisation of hMSC osteogenic differentiation .................................................... 159 6.2.5.1 Intracellular alkaline phosphatase (ALP) ............................................................ 159 6.2.5.2 Collagen production ............................................................................................ 159 6.2.5.3 Calcium production ............................................................................................. 160 6.2.6 BMP2 functionalisation of MEW scaffolds ................................................................... 160 6.2.6.1 BMP2 adsorption onto scaffolds ......................................................................... 160 6.2.6.2 BMP2 release kinetics ......................................................................................... 160 6.2.6.3 Characterisation of osteogenic differentiation ..................................................... 161 6.2.7 Statistical analysis .......................................................................................................... 161 6.3 Results ...................................................................................................................... 161 6.3.1 MEW fibre topography is significantly altered by bulk and surface modification ........ 161 6.3.2 CaP treatments modify surface chemistry ..................................................................... 163 6.3.2.1 Element analysis .................................................................................................. 163 6.3.2.2 Crystal structure of surface and bulk modifications ............................................ 164 6.3.2.3 Calcium content of PCL modifications ............................................................... 165 6.3.2.4 Surface treatment enhances material hydrophilicity ........................................... 165 6.3.3 Mechanical properties are enhanced via HA-incorporation into PCL MEW fibres ...... 166 6.3.4 Attachment and proliferation of hMSCs ........................................................................ 167 6.3.5 Surface treatment significantly enhances human stem cell osteogenesis ...................... 168 6.3.5.1 ALP activity ........................................................................................................ 168 6.3.5.2 hMSC Collagen production ................................................................................. 168 6.3.5.3 hMSC Calcium production .................................................................................. 169 6.3.6 Coating dissolution after long term culture ................................................................... 170 6.3.7 Mineral architecture mediates BMP2 controlled release and further enhances hMSC osteogenesis ............................................................................................................................. 171 6.4 Discussion ................................................................................................................. 173 6.5 Conclusion ................................................................................................................ 178 Chapter 7 Mechanically activated osteocyte-derived extracellular vesicle functionalised melt electrowritten materials for bone regeneration: A mechanobiomimetic scaffold ........................................................................................... 181 7.1 Introduction .............................................................................................................. 181 X 7.2 Materials and methods .............................................................................................. 185 7.2.1 MEW ............................................................................................................................. 185 7.2.2 Nano-needle hydroxyapatite (nnHA) coating ............................................................... 186 7.2.3 Osteocyte cell culture .................................................................................................... 186 7.2.4 Extracellular vesicle isolation from conditioned media ................................................ 187 7.2.5 Functionalising MEW constructs with EVs and CM .................................................... 187 7.2.6 SEM imaging and EDX ................................................................................................ 188 7.2.7 Immunofluorescent staining of MEW-EV constructs ................................................... 188 7.2.8 hMSC culture ................................................................................................................ 188 7.2.9 Proliferation .................................................................................................................. 189 7.2.10 Characterisation of hMSC osteogenic differentiation ................................................... 189 7.2.10.1 Intracellular ALP ................................................................................................ 189 7.2.10.2 Collagen production ........................................................................................... 189 7.2.10.3 Calcium production ............................................................................................ 190 7.2.11 Statistical analysis ......................................................................................................... 190 7.3 Results ....................................................................................................................... 191 7.3.1 Fabrication of CM and EV functionalised scaffolds ..................................................... 191 7.3.2 Characterisation of CM and EVs .................................................................................. 192 7.3.3 Attachment and proliferation of hMSCs ....................................................................... 193 7.3.4 MSC osteogenesis ......................................................................................................... 194 7.3.4.1 ALP activity ........................................................................................................ 194 7.3.4.2 Collagen production ........................................................................................... 195 7.3.4.3 Mineral production ............................................................................................. 196 7.3.4.4 Mineral characterisation ..................................................................................... 198 7.4 Discussion ................................................................................................................. 199 7.5 Conclusion ................................................................................................................ 204 Chapter 8 Discussion ........................................................................................................ 207 8.1 Stream 1: Indirect cues for bone regeneration .......................................................... 210 8.2 Stream 2: Direct cues for bone regeneration ............................................................. 212 8.3 Development of a bone mechano-biomimetic scaffold............................................. 215 8.4 Limitations and future directions .............................................................................. 217 8.5 Conclusions ............................................................................................................... 222 References .......................................................................................................................... 225 List of figures ..................................................................................................................... 247 List of tables ....................................................................................................................... 255 Supplementary figures and tables ................................................................................... 257 XI Publications Eichholz, K.F. and Hoey, D.A. Mediating human stem cell behaviour via defined fibrous architectures by melt electrospinning writing. Acta Biomater, 2018. 75: p. 140-151. Eichholz, K.F. and Hoey, D.A. Design and build of a melt electrowriting apparatus. (In preparation) Eichholz, K.F., Woods, I., Johnson, G.J., Shen, N., Corrigan, M., Labour, M.N., Wynne, K., Lowry, M.C., O’Driscoll, L., Hoey, D.A. Osteocytes regulate human bone marrow mesenchymal stem cell behaviour via mechanically activated osteocyte-derived extracellular vesicles (MAEVs). (In preparation) Eichholz, K.F. and Hoey, D.A. Melt electrospun written scaffolds with tailored fibrous and mineral architectures to enhance protein delivery and human MSC osteogenesis for bone regeneration. (In preparation) Eichholz, K.F., Federici, A., Mahon, O.R., Hoey, D.A. Mechanically activated osteocyte- derived extracellular vesicle functionalised melt electrowritten materials for bone regeneration: A mechanobiomimetic scaffold (In preparation) Book chapters Eichholz, K.F. and Hoey, D.A. The Role of the Primary Cilium in Cellular Mechanotransduction, in Mechanobiology, C.F. Rawlinson, Editor. 2017, John Wiley & Sons, Inc: Hoboken, New Jersey. XII Conference abstracts Eichholz, K.F. and Hoey, D.A. Mimicking Cellular and ECM Mechanobiological Cues to Drive MSC Osteogenesis and Bone Regeneration. 25th Annual Conference of the section of Bioengineering of the Royal Academy of Medicine in Ireland, Limerick, 2019. Eichholz, K.F. and Hoey, D.A. Mediating Human Stem Cell Behaviour Via Defined Fibrous Architectures By Melt Electrospinning Writing. In: Proc. of the European Orthopaedic Research Society, Galway, Ireland, 2018. Eichholz, K.F., Woods, I., Shen, N., Johnson, G.J., Corrigan, M., Labour, M.N., Wynne, K., Lowry, M.C., O’Driscoll, L., Hoey, D.A. Quantitative analysis of the osteocyte secretome following oscillatory fluid shear stimulation. In: Proc. of the European Orthopaedic Research Society, Galway, Ireland, 2018. Eichholz, K.F. and Hoey, D.A. Melt electrospun written constructs for skeletal tissue regeneration: The effect of fibre architecture on YAP signalling and hMSC differentiation. World Congress of Biomechanics, Dublin, Ireland, 2018. Eichholz, K.F., Johnson, G.J., Corrigan, M., Labour, M.N., Wynne, K., Hoey, D.A. Quantitative analysis of the osteocyte secretome following oscillatory fluid shear stimulation. In: Proc. of the Orthopaedic Research Society, New Orleans, USA, 2018. Eichholz, K.F. and Hoey, D.A. Melt electrospun written constructs for skeletal tissue regeneration: The effect of fibre architecture. In: Proc. of the Orthopaedic Research Society, New Orleans, USA, 2018. Eichholz, K.F. and Hoey, D.A. Melt Electrospun Written Constructs For Skeletal Tissue Regeneration: The Effect Of Fibre Architecture. 24th Annual Conference of the section of Bioengineering of the Royal Academy of Medicine in Ireland, Dublin, 2018. XIII Eichholz, K.F. and Hoey, D.A. Melt Electrospun Written Scaffolds As In vitro Platforms For Cell Culture: The Effect Of Scaffold Pore Architecture. TERMIS EU Meeting, Davos, Switzerland, 2017. Eichholz, K.F. and Hoey, D.A. Melt Electrospun Written Scaffolds As In vitro Platforms For Cell Culture: The Effect Of Scaffold Pore Architecture. 23rd Annual Conference of the section of Bioengineering of the Royal Academy of Medicine in Ireland, Belfast, 2017. Eichholz, K.F. Design and Manufacture of an Innovative Biofabrication Method for 3D Tissue Engineering Constructs. 19th Sir Bernard Crossland Symposium, Belfast, 2016. Eichholz, K.F., Mac Guinness, A.D., Hoey, D.A. Design and Fabrication of Tissue Engineering Scaffolds using Melt Electrospinning Writing. In: Proc. of the Orthopaedic Research Society, Florida, US, 2016. Eichholz, K.F. and Hoey, D.A. Design And Fabrication Of Tissue Engineering Scaffolds Using Melt Electrospinning Writing. 22nd Annual Conference of the section of Bioengineering of the Royal Academy of Medicine in Ireland, Galway, 2016. Eichholz, K.F. and Hoey, D.A. Design of a 3-axis Direct Writing Apparatus for Controlled Deposition of Melt Electrospun Fibres. 21st Annual Conference of the section of Bioengineering of the Royal Academy of Medicine in Ireland, Dublin, 2015. XIV Nomenclature This is a list of commonly used abbreviations used in this thesis. Any other abbreviations will be explained in the text when used. ALP Alkaline phosphatase ANOVA Analysis of variance BMP2 Bone morphogenic protein 2 BSA Bovine serum albumin C Control CAD Computer aided design CaP Calcium phosphate COX2 Cyclooxygenase 2 DMEM Dulbecco's modified eagle medium DNA Deoxyribonucleic Acid ECM Extracellular matrix EDX Energy-dispersive x-ray spectroscopy EV Extracellular vesicle FBS Fetal bovine serum FDM Fused deposition modelling HA Hydroxyapatite hMSC Human mesenchymal stem cell iHA Incorporated hydroxyapatite MAEV Mechanically activated osteocyte-derived extracellular vesicles MEW Melt electrowriting / melt electrospinning writing miRNA Micro RNA (ribonucleic acid) MLO-Y4 Osteocyte cell line from murine long bone osteocyte Y4 MSC Mesenchymal stem cell NaOH Sodium hydroxide nHA Nano-hydroxyapatite NM Normal medium nnHA Nano-needle hydroxyapatite OCN Osteocalcin OM Osteogenic medium OPN Osteopontin OSX Osterix XV PBS Phosphate buffered saline PCL Polycaprolactone pHA Plate hydroxyapatite PID Proportional-integral-derivative RUNX2 Runt-related transcription factor 2 S10 10° scaffold architecture S45 45° scaffold architecture S90 90° scaffold architecture SBF Simulated body fluid SEM Scanning electron microscope TEM Transmission electron microscope SD Standard deviation SR Random scaffold architecture TCP Tricalcium phosphate TE Tissue engineering TTCP Tetracalcium phosphate XRD X-ray diffraction YAP Yes-associated protein XVI 1 Chapter 1 Introduction 1.1 The need for new strategies to regenerate tissue There is an ever-increasing need for solutions to heal and replace damaged and diseased tissue. This can be appreciated by the millions of grafting procedures performed every year worldwide, including 2,000,000 bone graft procedures (Campana et al., 2014), 800,000 coronary artery bypass grafts (Grand View Research, 2017) and 300,000 anterior cruciate ligament constructions (Giedraitis, Arnoczky, & Bedi, 2014), in addition to the 11,000,000 people requiring medical attention for severe burns each year (World Health Organisation, 2017). The vast majority of these procedures utilise autografts, which have two substantial drawbacks due to the necessity of a second surgical donor site as well as the limited amount of tissue which may be harvested. Allografts are also commonly used, however, this approach is also limited in terms of the amount of tissue which may be taken, as well as issues associated with biocompatibility and the increased potential for triggering an immune response. Synthetic engineered scaffolds for tissue regeneration are thus an attractive solution and have the potential to overcome the above issues to provide a reliable and effective source of tissue for regenerative applications in vivo. Moreover, use of these scaffolds to engineer tissues in vitro has considerable potential for the development of tissue models or organoids. These may aid in the further understanding of native tissue behaviour, in addition to their use as powerful biological platforms for the study of development and disease, and the safe and ethical development of pharmaceutical therapies. 2 1.2 Mechanobiological cues driving tissue regeneration Throughout the body, cells are intimately intertwined with their surrounding environment. Both intrinsic and extrinsic forces play a fundamental role in defining this environment, which in turn guides cell behaviour in response to the constantly changing external cues. The mechanobiology of a cell’s surrounding micro-environment is thus crucial in mediating its behaviour and ensuring tissue specific physiological homeostasis. Two key contributors to mediating this behaviour are the biophysical architecture/mechanical properties of the surrounding matrix in which the cells reside, and the biochemical factors released by resident/adjacent cells in response to adaptations in the mechanical environment. In bone, the close relationship between these cues and stem cell behaviour is of particular interest, due to the crucial role of stem cells in ensuring the continued regeneration and repair of this tissue. Indirect biochemical cues released from osteocytes recruit stem cells from the surrounding periosteum and endosteum, and further drive osteogenic differentiation in conjunction with direct biophysical cues upon binding of the stem cell to the underlying matrix. Changes in specific tissue mechanical environments can have both local and systemic effects through the release of mechanically-mediated biochemical cues from resident cells that act via an autocrine or paracrine manner to influence neighbouring cells within the tissue, as well as to much greater distances to different tissues and organs throughout the body. This indirect biophysical regulation of cell behaviour is of particular importance in bone, which comprises a range of cell types working in unison to continuously maintain the tissue in response to the complex loading regimes to which it is subjected throughout everyday activity. It is known that cells within the matrix of bone, in particular the osteocyte which is by far the most abundant cell in bone, can detect forces via a combination of means including direct mechanical strain and interstitial fluid flow 3 induced shear forces (van Oers, Wang, & Bacabac, 2015; Weinbaum, Cowin, & Zeng, 1994). In response. the osteocyte subsequently sends signals to other bone residing cells to infer a response and help the tissue adapt to the changing mechanical environment (Dallas, Prideaux, & Bonewald, 2013). Mechanically stimulated osteocytes have been shown to promote osteoblast proliferation and recruitment (Brady, O'Brien, & Hoey, 2015) and inhibit osteoclast formation (Tan et al., 2007; You et al., 2008) via a paracrine mechanism. Importantly, osteocytes are also known to enhance the recruitment and osteogenic differentiation of stem cells (Brady et al., 2015; Hoey, Kelly, & Jacobs, 2011) via the release of various factors (P. M. Govey et al., 2014; Moester, Papapoulos, Löwik, & van Bezooijen, 2010), which is of great importance for the continued regeneration of bone. The specific means by which these factors mediate cell behaviour, along with the complete identification of the factors themselves, is yet to be fully understood however. The importance of these signalling cues in mediating tissue appropriate behaviour can truly be appreciated in cases of disease. For example, sclerostin expression is mediated by the osteocyte, with mechanical loading resulting in the inhibition of osteocyte expressed sclerostin and increased bone formation (A. G. Robling et al., 2008). This has been exploited in a treatment for osteoporosis, where antibody treatment to inhibit sclerostin expression enhances bone formation in vivo (Xiaodong Li et al., 2009), and has been shown in clinical trials to increase bone mineral density and reduce fracture risk (McClung, 2017). The extracellular matrix (ECM) imposes a direct, biophysical constraint on the degree to which cells can interact with and spread within their surrounding matrix. In bone, this matrix is comprised of a composite structure composed primarily of collagen fibres and mineral crystals, with collagen fibres at the endosteum and periosteum aligning in a load dependent manner in response to extrinsic forces (Foolen et al., 2008; McMahon, Boyde, & Bromage, 1995). Cell density, shape and degree of spreading are fundamentally defined by the underlying matrix in bone, which provides the blueprints to guide appropriate cellular 4 behaviour in addition to driving stem cell commitment towards the osteogenic lineage to ensure constant regeneration (Dupont et al., 2011; McBeath, Pirone, Nelson, Bhadriraju, & Chen, 2004). A secondary variable of great importance which is defined by the matrix architecture is matrix stiffness, which is 25–40 kPa at the collagen precursor to bone laid down by osteoblasts, with this being the optimal range upon which MSCs undergo differentiation (Engler, Sen, Sweeney, & Discher, 2006). It is known that cells can sense this stiffness and exert cytoskeletal tension in response, which in turn can trigger a cascade of responses from initial alterations in cell shape through to controlling the cell’s final fate and lineage commitment (Engler et al., 2006; Wells, 2008). This has been demonstrated in a range of cell types within bone, including stem cells, osteoblasts and endothelial cells, in addition to other cells throughout the body including neurons, myoblasts, fibroblasts, which may behave in vastly different ways and differentiate towards different lineages in response to altered matrix architecture and stiffness (Y. Yang, Wang, Gu, & Leong, 2017). As with biochemical cues, the importance of tissue specific architecture in maintaining physiologically appropriate behaviour can truly be appreciated by considering cases of disease, and how this can influence the architectural and mechanical properties of native tissue. For example, inappropriately aligned fibres surrounding stroma can facilitate tumour cell migration and metastasis (Hogrebe, Reinhardt, & Gooch, 2017b), while osteoarthritis is associated with altered fibrous architecture in the superficial zone of cartilage resulting in the amplification of tissue strain causing further cell damage and death (Saarakkala et al., 2010). Appropriate signalling cues are thus fundamental for maintaining physiologically relevant behaviour and guiding appropriate tissue growth and regeneration, with these being present in bone in the form of indirect, mechanically mediated biochemical cues and direct, matrix mediated biophysical cues. It is thus of utmost importance to consider and understand the physical and biochemical cues present in the native environment of bone 5 and how these influence stem cell behaviour. This knowledge can then be used to design safe, effective and powerful bioengineering strategies for biologically inspired bone tissue regeneration. 1.3 MEW as a means to control the tissue microenvironment Although cellular derived biochemical cues can be isolated from conditioned media, the ability to fabricate platforms that mimic the precise architecture and scale of the ECM of tissues is a considerable. MEW is a recently developed 3D printing technique which has the capability of fabricating fibres on the micron to sub-micron scale and precisely controlling their deposition in three dimensions (Brown, Dalton, & Hutmacher, 2011; Hochleitner et al., 2015). The unique combination of ECM like fibre production and 3D printing control yields an extremely powerful biofabrication technology with the potential to create complex microenvironments which guide cell behaviour in a specific and desired way. Fibres may be precisely stacked on top of one another to fabricate large volume constructs with precise microarchitectures (F.M. Wunner, Wille, et al., 2018), collected on rotating mandrels to form micro-fibrous tubular structures (McColl, Groll, Jungst, & Dalton, 2018) and used to fabricate scaffolds with intricate non-linear fibre architectures to define complex mechanical environments (Miguel Castilho, Mil, et al., 2018; Hochleitner, Chen, et al., 2018). The great potential of this technology can be seen in the rapid acceleration of MEW based constructs which have been developed for biomedical engineering applications since the technology was first described in 2011 (Brown et al., 2011). Constructs have been developed for applications ranging from tissue engineering strategies for a host of tissue types including bone (Baldwin et al., 2017), cartilage (Visser et al., 2015), skin (Farrugia BL, 2013) and cardiac tissue (Miguel Castilho, Mil, et al., 2018), to models for the study of prostate (Holzapfel et al., 2014), breast (Thibaudeau et al., 2014) and bone (Wagner et al., 2016) tumours, to constructs to be used as platforms for 6 delivering cancer immunotherapy treatments (Delalat et al., 2017). Many of these constructs have used MEW scaffolds as the foundation upon which to define the microarchitecture perceived by the cells, before the further addition of components such as growth factors, drugs, hydrogels and minerals to further define the cell microenvironment. This technology thus has the potential to yield powerful and effective strategies in combination with specific growth factors and signalling molecules to precisely mediate cell behaviour for specific biomedical engineering applications. Despite this potential, there are only a few studies which have investigated the role of the defined fibrous architectures, achievable via MEW, on cell behaviour (F. Tourlomousis, Boettcher, Ding, & Chang, 2017; Filippos Tourlomousis & Chang, 2017). Further understanding of the mechanisms by which complex fibrous microarchitectures mediate cell behaviour will undoubtedly progress the already immense potential of this technology in the field of bioengineering. This, in combination with further functionalisation with specific growth factors and signalling molecules which are present in the native tissue environment, will allow for the fabrication of powerful, highly specific microenvironments to intricately guide the desired cell behaviour for a given biomedical engineering or tissue engineering application. 1.4 Objectives of thesis Bone is characterised by a complex microenvironment consisting of a range of cell types signalling to one another in a constantly changing highly dynamic environment. Stem cells are a fundamental component of this system, responsible for bone development and playing key roles in bone growth, regeneration and healing via constant replenishment of the native cell population. Stem cell behaviour is driven by both direct and indirect biophysical cues in bone, with these cues providing the blueprints for guided stem cell recruitment and differentiation. The objective of this thesis is to study the complex microenvironment of bone and elucidate the appropriate direct and indirect biophysical 7 cues to drive osteogenic stem cell behaviour. This knowledge will be used to engineer safe, effective biomimetic strategies to regenerate bone. The ultimate goal is to design a next generation bone tissue regeneration strategy via the fabrication of an optimised microarchitecture as a foundation upon which to define specific mineral and biological components to elicit an enhanced osteogenesis response from a native stem cell population. This will be achieved via five specific objectives in two main streams, A and B, as shown below. A schematic of this thesis project outline is also shown in Figure 0-1. A. Investigate the role of the osteocyte in mediating stem cell behaviour, facilitating the identification of biological factors for scaffold functionalisation: 1. Study the role of the osteocyte in mechanically mediated signalling to human mesenchymal stem cells (hMSCs). A proteomic analysis will be conducted on the secretome of the osteocyte under static and dynamic conditions to form a map of potential mechanically regulated therapeutic targets to mediate stem cell behaviour. The key role of EVs in these processes will also be investigated. B. Fabricate an optimised MEW microarchitecture to mediate stem cell behaviour: 2. Design and build a MEW apparatus. The effect of system parameters on deposition characteristics will be investigated, and the system tuned for precise fibre deposition. This apparatus will be used to fabricate scaffolds with precise microenvironments for tissue engineering applications. 3. Investigate the role of fibrous architecture in mediating human stem cell behaviour. Various scaffold architectures will be fabricated via MEW after which the mechanisms by which stem cells are influenced by the scaffolds will be investigated in terms of cell morphology, cell behaviour, proliferation and osteogenic differentiation. An optimal design for further development in this thesis will finally be identified. 8 4. Develop methods by which to modify MEW scaffolds with a mineral component to enhance osteogenic differentiation for bone regeneration. The previously identified optimal architecture will be utilised as a foundation for this work. Scaffolds with incorporated calcium phosphates will also be fabricated by forming a composite material for MEW. The protein loading characteristics of these modified constructs will also be investigated, to assess drug loading capacity and release profiles for further therapeutic applications. Finally, these two streams will be combined to achieve the ultimate goal of this thesis: 5. Develop a biomimetic fibrous scaffold with controlled nanotopography functionalised with MAEVs to harness the regenerative potential of mechanobiological cues and significantly enhance bone repair 9 Figure 0-1 Schematic illustrating outline of thesis. Two project streams will be followed with the aim of recapitulating the bone stem cell niche, with the final goal of developing a mechano-biomimetic scaffold for bone regeneration. 10 11 Chapter 2 Literature review 2.1 Introduction Direct and indirect biophysical cues jointly orchestrate cell behaviour throughout the body. This is particularly seen to be the case within bone, where these cues define the dynamic stem cell niche, which is a fundamental for the continuous, controlled regeneration of bone tissue (P. M. Govey, Loiselle, & Donahue, 2013). An understanding of the mechanisms by which the stem cell niche within bone behaves will provide powerful, biomimetic tools for the developments of therapeutics to regenerate diseased and damaged bone. To achieve this, a thorough understanding of the mechanobiology of bone tissue is key. This literature review will thus begin with an introduction to bone biology, before going into greater detail on the crosstalk between the different cells involved in bone regeneration, with a focus on signalling between stem cells and the osteocyte. Furthermore, the role of the surrounding matrix and associated mechanical forces in mediating osteocyte mechanosignalling will also be discussed. Next, the role of tissue architecture and mineral topography will be discussed, with a focus on how stem cells interact with their surrounding matrix in bone, and the implications for this in driving appropriate cell behaviour. How tissue architecture may be altered with disease and the implications of this for further local and systemic disease development will also be discussed, with this providing key insights into the importance of physiologically appropriate cellular behaviour. Taken together, this information will provide key insight for the development of tissue regeneration strategies which can be closely integrated with the biology and mechanics of native healthy tissue. 12 Previous approaches by which tissue regeneration strategies have been developed will then be discussed, with a focus on two technologies in particular: electrospinning and 3D printing. These two technologies will be discussed due to the sub-micron scale fibrous architectures which can be achieved and the great level of control which can be gained over architecture respectively. These encompass key capabilities which together give substantial control over the architectures which may be fabricated for regenerative medicine applications. A relatively new technology, MEW, does just this, and combines these technologies to form a powerful fabrication strategy with enormous potential. This biofabrication strategy will be introduced and discussed in terms of the underlying technology, fabrication capabilities, and current applications in regenerative medicine. Finally, advanced approaches which have developed this technology for applications in bone regeneration in particular will be discussed, including the development of composite materials, multi-phasic scaffolds, and incorporation of biochemical cues for enhanced therapeutic benefit. 2.2 Bone Anatomy 2.2.1 Cell types There are several types of cells within bone which collectively regulate the formation, growth and repair of the tissue. One such family of cells is derived from mesenchymal cells (MSCs), which are precursor cells found within the marrow and periosteum. These MSCs are critical components of bone development and are the main source of bone marrow stromal cells, which in turn differentiate into osteoblasts and subsequently into osteocytes (Manolagas, 2000). The osteoclast is another cell resident in bone and is derived from a separate lineage of monocyte/macrophage cells originating from hematopoietic stem cells. These cells and their basic functions will be introduced below, 13 with a more in-depth discussion of signalling and crosstalk between these cell types being conducted in section 2.3. Mesenchymal stem cells (MSCs) are precursor cells which play key roles in bone development, differentiating into osteoblasts which lay down bone matrix, and which in turn differentiate into osteocytes. This class of cells have been isolated from bone marrow and expanded in culture and have demonstrated a capacity to differentiate in vitro, leading to them being given the name MSCs. These cells are now known to arise from pericytes and adventitial progenitors, collectively known as perivascular stem cells (PSCs), with evidence also suggesting a possible non-blood vessel source in cranial sutures (Murray & Péault, 2015). There is still much debate over what exactly constitutes an MSC, and if these cells may truly be considered stem cells for regenerative purposes. The name was originally coined by Caplan (A. I. Caplan, 1991) due to his and other researchers’ findings that this cell could give rise to osteoblasts, chondrocytes, adipocytes and fibroblasts among others (Charbord, 2010). Recently, a more specific cell which can differentiate into bone, cartilage and stroma alone has been identified and characterised, with this being termed a skeletal stem cell (SSC) (Chan et al., 2018). While isolated MSCs or SSCs can self-renew and differentiate in vitro, there is a lack of evidence for long term skeletal regeneration or engraftment of these cells to bone or bone marrow in vivo and whether they behave as bona fide stem cells is still in question (Murray & Péault, 2015). Nonetheless, their importance in bone biology and key roles in signalling with other cells is well appreciated, leading to an alternative name of medicinal signalling cells being proposed (Arnold I. Caplan, 2017). For the remainder of this thesis, the term MSC will be used to denote “mesenchymal stem cell”, with this remaining the most accepted and commonly used term in the literature to date. Osteoblasts are cuboidal cells which are located on the surface of bone in a single layer. Their primary function is the synthesis of bone matrix which occurs by first depositing an organic matrix of collagen, other non-collagenous proteins such as 14 osteocalcin (OCN) and osteopontin (OPN), and proteoglycans (Florencio-Silva, Sasso, Sasso-Cerri, Simões, & Cerri, 2015). Subsequently, matrix vesicles are released, which due to their negative charge, immobilize calcium ions. ALP is also released by osteoblasts, resulting in the degradation of phosphate-containing compounds and release of phosphate ions inside the matrix vesicles. The calcium and phosphate ions within the vesicles then nucleate to form hydroxyapatite (HA) crystals, which after growth, eventually leads to their rupture and spreading of mineral crystals to the surrounding matrix. A quiescent variation of this cell is present on bone surfaces where bone remodelling does not occur, with these being given the name bone lining cells. Osteocytes are the most abundant cell type in bone, comprising 95% of all bone cells with an average density of 20,000 - 80,000 cells/mm3 bone tissue and a life span of up to several decades (Franz-Odendaal, Hall, & Witten, 2005). They originate from osteoblasts, which become terminally differentiated as osteocytes after becoming embedded in secreted matrix. They play key roles in coordinating the behaviour of other cell types in bone and throughout the body via communication by secreted factors (Bonewald, 2011). Osteocytes extend numerous dendritic processes which connect adjacent osteocytes forming a sensory network throughout bone tissue termed the lacuna-canalicular (LC) network. This network provides the platform through which osteocytes can sense changes in the external mechanical environment such as fluid flow induced shear stress, and signal to other cells within bone to adapt the tissue to these changes. The osteocyte can be considered an orchestrator of bone biology and remodelling and is thus of great relevance for tissue function. The osteocyte and its specific roles in signalling and tissue regulation will be discussed in greater detail in section 2.3. In contrast to the above cell types, osteoclasts are derived from the hematopoietic stem cell lineage. They are large, multinucleated cells, formed via osteoclastogenesis which is mediated via RANKL (Florencio-Silva et al., 2015). When this factor binds to RANK 15 receptors in osteoclast precursors, osteoclasts are formed. Conversely, osteoblasts release osteoprotegerin (OPG) which acts as a decoy receptor also binding to RANKL, inhibiting osteoclastogenesis. It is through this process that osteoclast numbers are controlled and the fine balance between bone resorption and deposition is maintained (Boyle, Simonet, & Lacey, 2003). 2.2.2 Development and healing Understanding the mechanisms by which bone naturally develops and heals is useful for the development of regenerative strategies, which may exploit the natural behaviour of cells in order to form a strategy to heal bone. Bone development may occur via two methods; intramembranous ossification and endochondral ossification. Intramembranous ossification, which creates cortical and cancellous bone, is responsible for creating most of the cranial bones, flat bones of the face and the clavicles (K. A. Young et al., 2013). It is initiated when MSCs proliferate and form compact nodules, before developing into capillaries as well as osteogenic cells (Gilbert, 2000) (Figure 2-1). Osteoblasts become separated from the region of calcification via a secreted osteoid matrix which calcifies due to mineral deposition, with some cells also becoming trapped in this matrix and differentiating into osteocytes. Trabeculae begin to form around this ossification region, with mesenchymal cells on the outer regions forming the periosteum. Blood vessels form within the region forming red bone marrow, with remodelling also taking place via osteoclasts. 16 Figure 2-1 The stages of intramembranous ossification. Clusters of mesenchymal cells form in the embryonic skeleton (A), which begin to differentiate into osteogenic cells and secrete matrix which becomes mineralised (B). Trabeculae radiate from this ossification region, with mesenchymal cells lining the periphery and blood vessels branching through them (C). The periosteum is formed and red bone marrow forms from blood vessels, with remodelling continuing via osteoclasts (D). (K. A. Young et al., 2013) Endochondral ossification is the process but which long bones are formed within the body, in addition to the bones at the base of the skull. Cartilage tissue first forms from an aggregation of mesenchymal cells which differentiate into chondrocytes, with this forming the template for subsequent ossification and bone formation. Chondrocytes in the centre begin to increase in size, and more matrix is produced and becomes calcified, eventually limiting nutrient transfer resulting in cell death (K. A. Young et al., 2013). The cartilage matrix then begins to break down, with blood vessels invading the resulting voids and expanding them to form a cavity. Blood vessels also supply osteogenic cells, which form a periosteal collar consisting of cortical bone around the diaphysis at the centre of the developing bone. A primary ossification centre forms within the diaphysis, resulting in cortical bone formation radiating towards the epiphyses at the ends of the bone. 17 Simultaneously, chondrocytes continue proliferating and forming cartilage, increasing the length of the developing bone before cartilage is replaced by bone. Secondary ossification centres form postnatally in the epiphyses, resulting in cartilage becoming replaced with cancellous bone in these regions with the exception of the surface, at which articular cartilage forms. An epiphyseal plate, also called the growth plate, allows further proliferation of cartilage and subsequent replacement with bone to continue in this region until bones have fully formed in length. Bone modelling also occurs during bone growth, with this resulting in an increase in bone diameter. Resorption of endosteal bone at the outer surface of the medullary cavity occurs via osteoclasts, along with deposition of bone beneath the periosteum via osteoblasts. Figure 2-2 The stages of endochondral ossification. A cartilage template first develops via an aggregation of mesenchymal cells which differentiate into chondrocytes (1). Cells in the centre become hypertrophic, with nutrient transfer becoming limited after further matrix deposition, resulting in cell death and infiltration of voids by blood vessels (2). Blood vessels supply osteogenic cells, which form a primary ossification centre (3), which expands towards the epiphyses replacing the cartilage template with bone. Secondary ossification centres form after birth (4), and bone increases in length via chondrocyte proliferation at the epiphyseal (growth) plate, while osteoblasts simultaneously develop cortical bone. This continues until the bone has 18 reached its final length and structure with complete fusion of the epiphyseal plates (6). (Mescher & Junqueira, 2013) Bones are continuously remodelled in adulthood, with old tissue and damaged bone being resorbed by osteoclasts, before deposition of new bone matrix by osteoblasts allowing defects and microfractures to be replaced by new tissue. The collaboration of osteoclasts and osteoblasts in this process is called a basic multicellular unit (BMU). In cortical bone, a cylindrical canal approximately 2 mm long and 175 μm wide penetrates the bone at a speed of approximately 20-40 μm/day (Hadjidakis & Androulakis, 2006). Approximately 10 osteoclasts form a tunnel in the dominant direction of loading, with thousands of osteoblasts subsequently filling the tunnel and forming new tissue. The process is similar in cancellous bone, with osteoclasts travelling along the surface of trabeculae and forming trenches which are then refilled with osteoblasts. In the event of serious trauma such as fracture, bone has the capability to regenerate itself. In less serious cases, this may occur via primary (contact) healing. If there is stable contact at the fracture point and a gap of under 0.01 mm, healing may occur similar to bone remodelling, with osteoclasts crossing the fracture point and osteoblasts remodelling the region as outlined above (Marsell & Einhorn, 2011). However secondary (indirect) healing occurs much more commonly. A hematoma first forms, providing a large range of growth factors and cells, while inflammatory factors promote angiogenesis. MSCs are recruited from bone marrow, surrounding tissues and systemically from the circulatory system. Endochondral ossification occurs within the hematoma, with cartilaginous tissue providing stability until bone formation and remodelling occurs. Intramembranous ossification also occurs directly adjacent to the fracture ends, which when bridged, increases rigidity and allows a degree of weight bearing (Marsell & Einhorn, 2011). Tissue is disorganised at first, with remodelling occurring via the osteoblast/osteoclast BMUs to restore the loading optimised structure of the tissue. 19 2.2.3 Hierarchical structure and composition Bone is a hierarchical structure with two types on the macro scale: cortical (compact) and cancellous (spongy). Both of these types of bone are found throughout the body. Due to its greater strength, cortical bone found in regions which experience high levels of loading or which require greater protection such as in the diaphysis of long bones and in the skull. Cortical bone consists of osteons, which consist of sheets of circumferentially arranged tissue called lamellae. These contain networks of blood vessels and nerves through their centre as well as vessels which run perpendicularly to adjacent osteons, with this network providing the tissue and cells with a means for nutrient and waste transfer (Figure 2-3A). Osteocytes are regularly distributed through the tissue inside lacunae. The highly compact nature of this osteon derived architecture allows the tissue to withstand the great forces present during movement and loading. Cancellous bone is found at the ends of long bones, in addition to other bones including the ribs, vertebrae, pelvic bones and skull. The basic sub-unit of cancellous bone is the trabecula, which contain lamellae and osteocytes as in cortical bone, however with a more irregular architecture and distribution (Figure 2-3B). As stated by Wolff’s law, healthy bone will adapt in response to loading (Frost, 1994). While this may occur in both cortical and cancellous bone, the greater capacity for trabeculae to arrange themselves in response to the load experienced in cancellous bone owes this tissue well to regions which experience complex loading patterns, for example in the femoral neck of the hip. 20 Figure 2-3 Structure of cortical (compact) bone (A), and cancellous (spongy) bone (B). Adapted from (K. A. Young et al., 2013) Further down the hierarchical structure of bone on the micro-scale, the organic component of the tissue is composed of collagen fibres of diameter 1 – 10 μm, which are arranged parallel to trabeculae in cancellous bone and in sheets of 90° offset between subsequent layers to form osteons in cortical bone (Figure 2-4) (Kane & Ma, 2013). Collagen provides the largest contribution towards the organic component of bone at 90%, with this comprising of primarily collagen type I. Collagen is a structural protein which provides the toughness for bone, as well as influencing bone cell proliferation, differentiation and apoptosis (M. F. Young, 2003). Collagen fibres are composed of fibrillar aggregations approximately 500 nm in diameter which in turn are composed of collagen molecules approximately 2 nm in diameter and 200 nm long. There are many other proteins which comprise the organic component of bone, including fibronectin, osteocalcin, osteopontin, alkaline phosphatase (ALP) and bone morphogenic proteins (BMPs), along with growth factors including insulin like growth factors (IGFs), transforming growth factors (TGFs), fibroblast growth factors (FGFs) and platelet derived growth factors (PDGFs) (Florencio-Silva et al., 2015). All of these components play various roles within bone. BMPs play a key role in bone formation in addition to regeneration in fracture healing (Solheim, 1998). IGFs are known to be involved in the recruitment and 21 proliferation of MSCs, while TGFs, FGFs, and PDGFs are all involved in maintaining normal cell physiology while also demonstrating roles in promoting tissue repair (Solheim, 1998). Figure 2-4 Hierarchical structure of bone (Kane & Ma, 2013) A large proportion of bone is composed of inorganic mineral, which in turn has a hierarchical structure closely integrated with the collagen component, with proteins and growth factors dispersed throughout this composite structure. Bone mineral comprises approximately 60-70% of the tissue by weight (Boskey, 2013), with this providing the majority of the stiffness and hardness of the tissue. The basic mineral unit of bone consists of nano-scale needles with approximate dimensions of base 5 nm and length 50 – 100 nm (Reznikov, Bilton, Lari, Stevens, & Kröger, 2018). These needles form platelets composed of partly merging crystals of the same base and diameter, with width 20 – 30 nm, which in turn form stacks and aggregates with irregular 3D structures of size 200 – 300 nm. Water is known to play a role in this crystal organisation, and contributes to the inorganic structure via mediating the orientation of mineral crystals (Y. Wang et al., 2013). Crystals are neither 22 exclusively intrafibrillar nor extrafibrillar but form a continuous crossfibrillar organisation which spans throughout and between collagen fibrils. This mineral organisation not only facilitates the high strength and stiffness of bone, but also provides a nano-scale structure to stabilise proteins and maintain their conformational structure (Yu et al., 2017). Remarkably, proteins within the mineral matrix of bone can be preserved for centuries (Yu et al., 2017), with the inverse relationship between protein stability and mineral feature size attesting to the great stability provided by the nano-structural features of bone. In terms of mineral composition, bone is often approximated to stoichiometric hydroxyapatite (HA). This is a member of the apatite family, referring to a group of phosphate minerals with general formula Ca5(PO4)3(F,OH,Cl), with F-, OH- and Cl- present in the most common forms being fluorapatite, hydroxyapatite and chlorapatite respectively, with geological apatite, the most abundant phosphate mineral in the crust of the Earth containing various proportions of these ions (Wopenka & Pasteris, 2005). However, biological bone apatite has several characteristics which differ significantly from HA, such as the presence of varying amounts of chemical substitutions, the significantly smaller percentage of hydroxyl groups (Loong et al., 2000), and the more disordered and protonated environment at the surface of crystals in biological minerals (Rey, Combes, Drouet, & Glimcher, 2009). Determining the precise chemical composition of bone brings many challenges, in part due to its complexity, presence of ions which are difficult to accurately measure to define their composition, and presence of a hydrated surface layer composed of bone and synthetic crystals containing a great variety of ions. Thus, several researchers have used synthetic calcium apatites, derived from natural geological apatites for example, to help gain a greater understanding of biological apatites. Remarkably, apatite is able to incorporate 50% of the elements of the periodic table, with substitutions that are known to occur in bone and tooth mineral including F, Cl, Na+, K+, Fe2+, Zn2+, Sr2+, Mg2+, carbonate (CO3 2-) and citrate (Wopenka & Pasteris, 2005). Of particular relevance is the 23 substitution of PO4 3 anions in the general hydroxyapatite formula with HPO4 2- and CO3 2-, which have also been detected in large amounts in bone mineral samples (Rey et al., 2009). Studies on synthetic apatites have also shown that there is a presence of non-apatite based mineral ions, as well as loosely bound ions on a hydrated surface layer as well as other ions and proteins in solution surrounding the mineral nanocrystals (Figure 2-5). In summary, while bone mineral may largely be approximated as stoichiometric hydroxyapatite, it is more accurately loosely defined as comprising a nano-plate/needle apatite base structure surrounded by a hydrated layer, disordered calcium phosphate (CaP) and loosely bound non-apatitic components. Figure 2-5 Schematic of the structure of bone mineral. The nanocrystal core is composed of non- stoichiometric apatite. A hydrated surface layer contains loosely bound ions, with other ions and proteins (Pr) present in the surrounding fluid. (Rey et al., 2009). Transmission electron microscope image illustrating the needle morphology of the basic mineral unit of bone (Reznikov et al., 2018). In conclusion, bone is a hierarchical tissue comprised primarily of micron scale collagen fibres and nano scale apatite crystals, with its structure being maintained by the native cell population including osteocytes, osteoblasts, osteoclasts and MSCs. Understanding this structure, and the role of the cells within, is critical for the development of strategies for tissue regeneration, and may additionally facilitate the development of bio- inspired scaffold designs to achieve this. 24 2.3 Bone mechanobiology 2.3.1 Introduction It is well known that the structure of bone adapts in response to changes in its mechanical environment (Kontulainen, Sievänen, Kannus, Pasanen, & Vuori, 2003). These adaptive changes are regulated by the resident cells within bone, which sense mechanical forces and transduce this information to generate signals and infer a response. An important component in this system is signalling from the osteocyte to osteoblasts and osteoclasts and their precursors, which mediate bone remodelling. Osteocytes, which are the most abundant cells in bone, sense mechanical forces and send signals to osteoclasts to target microcracks and osteoblasts to lay down new bone matrix (Alexander G. Robling & Turner, 2009). Osteocytes also play a key role in mechanosignalling to MSCs to enhance recruitment and osteogenesis (Birmingham et al., 2012). This process is fundamental for the replenishment of the cell population in bone, ensuring continuous bone regeneration. In addition, MSCs have been demonstrated to exhibit excellent therapeutic potential following in vivo transplantation (Parekkadan & Milwid, 2010). Understanding the specific mechanisms behind osteocyte mechanosignalling to MSCs thus has great potential to uncover novel mechano-therapeutics to guide MSC behaviour, with this being discussed in greater detail in the following sections. 2.3.2 Role of the osteocyte in mechanoadaptation Osteocytes are the primary sensing and metabolism controlling cells within bone tissue, and are key to directing the processes of bone formation and resorption via the release of various signalling molecules which act upon osteoblasts and osteoclasts or their progenitors (Dallas et al., 2013). The two overarching processes of interest in this regard are the means by which osteocytes infer information from their surrounding environment, and the mechanisms by which they communicate the changing stimulus in response. There 25 are several mechanisms by which it has been theorized that osteocytes detect the forces they are subjected to during bone loading, including sensing of direct mechanical strain, piezoelectric effects, electric ions generated by loading induced fluid flow, and fluid flow itself between osteocyte cell processes and canaliculi (van Oers et al., 2015). Fluid flow in vivo is one of the primary mechanisms thought to be responsible for the stimulation of osteocytes in the presence of macro scale loading, with flow induced fluid shear across the membrane of osteocyte processes believed trigger downstream mechanosignalling (Weinbaum et al., 1994). More recently it has been proposed that fluid flow through the lacunar-canalicular network induces strains in actin filament bundles more than an order of magnitude greater than strains on the tissue level (Han, Cowin, Schaffler, & Weinbaum, 2004). Another mechanism which may contribute to osteocyte mechanosensing is the primary cilium, an immobile solitary antennae like organelle which is present in osteocytes (Malone et al., 2007) and may translate information to the cell via bending and transmission of strain to the cell in the presence of fluid flow. Regardless of the precise mechanism or combinations thereof, fluid flow has been shown to be a key stimulus of osteocytes with this being demonstrated via both fluid structure interaction (FSI) modelling (Verbruggen, Vaughan, & McNamara, 2014) and in vitro experimentation. A range of studies have illustrated the role of the osteocyte in mediating behaviour in other cells, primarily via the collection of conditioned medium from osteocytes following loading via parallel plate flow bioreactors. The majority of these in vitro osteocyte studies use an osteocyte-like cell called MLO-Y4, which is commonly used due to its versatility as a cell line, similarity to primary osteocytes, and ability to respond to mechanical stimulation (Kato, Windle, Koop, Mundy, & Bonewald, 1997). While other cell lines have been developed which more closely resemble primary osteocytes, including IDG-SW3 (Woo, Rosser, Dusevich, Kalajzic, & Bonewald, 2011) and Ocy454 (Spatz et al., 2015), MLO-Y4 cells are still the most commonly used due to their well-established culture methods, ease of 26 use and well characterised behaviour. Co-culture studies has shown that fluid flow stimulation of osteocytes significantly reduces osteoblastic proliferation, and enhance differentiation as demonstrated by elevated ALP activity (Vezeridis, Semeins, Chen, & Klein-Nulend, 2006). Similar studies have validated these early findings while also demonstrating a role for gap junctions in this process (Taylor et al., 2007). In contrast, another study has demonstrated that mechanically stimulated osteocytes promote osteoblast proliferation as well as recruitment (Brady et al., 2015). Flow conditioned medium from osteocytes is also known to inhibit osteoclast formation, as demonstrated using multinucleated osteoclast progenitors isolated from bone marrow (Tan et al., 2007) and co- cultures of RAW264.7 macrophage cells with osteocytes and ST2 stromal cells (You et al., 2008). A role for the osteocyte in mediating stem cell behaviour following mechanical stimulation has also been shown, with enhanced migration, proliferation and osteogenic differentiation of MSCs following treatment with fluid shear stimulated osteocyte conditioned medium (Brady et al., 2015; Hoey et al., 2011). Remarkably, the osteocyte has also been shown to be involved in a large host of systemic functions, including regulating lymphoid organs and fat metabolism, increasing muscle myogenesis, influencing heart and liver function and suppressing growth of breast cancer and bone metastasis (Bonewald, 2017). 2.3.3 Osteocyte mechanosignalling The means by which the osteocyte communicates these biophysical stimuli to bone forming and resorbing effector cells is of great interest, with a host of studies investigating the possible factors released by osteocytes in response to mechanical stimulation. Nitric oxide (NO) (Klein-Nulend, Semeins, Ajubi, Nijweide, & Burger, 1995), prostaglandin E2 (Cheng et al., 2001; Cherian et al., 2005), ATP (Genetos, Kephart, Zhang, Yellowley, & Donahue, 2007), RANKL (Nakashima et al., 2011), OPG and macrophage colony- stimulating factor (M-CSF) (Zhao et al., 2002) have all be shown to be mechanosignalling 27 factors released by osteocytes in response to fluid shear, with these mediating a range of functions both within bone and systemically. One factor which has gained significant interest is sclerostin (SOST), which is a protein that is continually released resulting in the inhibition of Wnt-mediated bone formation (Moester et al., 2010). Expression of SOST is inhibited following mechanical loading (A. G. Robling et al., 2008; Shu et al., 2017), with this releasing the inhibition of Wnt signalling and stimulating bone formation. Anti- sclerostin therapies which are currently being investigated are in stage 3 clinical trials (Lewiecki, 2014). To gain a greater understanding of the role of osteocyte signalling in response to loading, several studies have performed transcriptome analyses via microarrays and proteomic analyses via mass spectrometry. These methods provide the advantage of facilitating the identification of a large datasets of gene/protein targets and their relative expression in response to loading. They also allow further detailed functional and pathway analyses to greater understand enrichments and interactions of defined groups of targets, thus significantly expanding our knowledge of osteocyte mechanobiology. One such study by Chen et al. investigated the transcriptome of the osteocyte following cyclic compressive force stimulation for several periods from 10 min to 6 h, with the greatest differential expression of targets (both upregulation and downregulation) compared to statically cultured cells occurring following 6 h stimulation (W. Chen et al., 2010). One cluster of genes with significantly upregulated expression following stimulation was highlighted in particular, containing a large number of chemokines and cytokines and which were associated with the significantly enriched “cytokine-cytokine receptor interaction pathway”. Interestingly, many of these genes were associated with bone resorptive signalling, indicating that the osteocyte may trigger resorption via osteoclasts and thus initiate bone remodelling in response to cyclic compressive forces. 28 A later study aimed to combine transcriptomic and proteomic analyses of the osteocyte to further reveal mechanosensitive signalling pathways (P. M. Govey et al., 2014). Cells were cultured in parallel plate flow chambers with a flow regime of 1 Pa and 1 Hz and were either lysed immediately or further cultured for 2, 8 or 24 h post stimulation. This revealed a range of transcripts and proteins which were differentially expressed with flow stimulation, as well as identifying a time course effect, where the greatest differential expression of transcripts and protein levels occurred at 2 hr and 8 hr post flow respectively. Many of the identified transcripts agreed with the previous work by Chen et al., while 24 proteins out of 558 were differentially expressed with fluid flow and several of these including NDK, calcyclin and GRK-6 being identified as possibly playing key roles in mechanotransduction. This study also identified for the first time a combined transcriptome/proteome signalling network which identified key signalling nodes which would not have been revealed by either method alone. The complex microenvironment of bone was later investigated in two further studies from this research group, which re- analysed the samples via RNA sequencing to more accurately quantify differential gene expression and further analyse network interactions to demonstrate fluid flow induced changes in genes which corresponded to downregulated osteoclast differentiation (Peter M. Govey, Kawasawa, & Donahue, 2015; F. Meng, Murray, Kurgan, & Donahue, 2018). The mechanobiology of the osteocyte has also been investigated via a more biologically accurate in vivo loading model (Wasserman et al., 2013). In this study, the C5 vertebra of mice were either loaded in a single treatment, loaded three times weekly over a four-week period, or unloaded in control mice. Medullary tissue was then isolated and digested to remove all cells except osteocytes with trabecular bone. RNA was isolated from pulverised trabeculae and analysed via microarray analyses. Continuous loading was found to result in the most differentially expressed genes, with a total of 1339 compared to 339 in mouse loaded in a single treatment only. Two of the most enriched biological processes in 29 differentially expressed genes were “cellular movement” and “cell-to-cell signalling and interaction”, again highlighting the role of the loaded osteocyte in mediating cell behaviour and recruitment. The authors also highlighted the differentially expressed genes which code for extracellular proteins, identifying a total of 55 with continuous loading. While several have of these had previously implicated with osteoblast and osteoclast behaviour, many had not, again highlighting the value of large scale proteomic and genomic studies to further our understanding of cell behaviour. Of note are the identification of several thrombospondins, which promote osteoblast mineralisation and Wnt5a, which is a Wnt signalling pathway agonist, a pathway which plays key roles in bone formation and regulation. Upregulation of Dmp1 upregulation with loading is also of interest, which plays a role in maintaining phosphate homeostasis in bone (Y. Lu, Yuan, et al., 2011). In summary, the osteocyte plays a primary role in sensing external forces and sending signals to other bone residing cells to respond and adapt to the dynamic mechanical environment. Osteocyte mechanosignalling to MSCs is of particular importance due to the latter’s role in constantly replenishing the cell population in bone. Understanding and exploiting how osteocytes achieve this has great potential to reveal novel therapeutics for bone regeneration. 2.4 Role of EVs in cell signalling 2.4.1 Introduction Much of the work investigating means of cell signalling has previously focused on factors such as cytokines, chemokines and hormones. Recently however, another means by which cells communicate via EVs has gained significant interest, with EVs being demonstrated to be fundamental to an extensive range of signalling functions throughout the body (van Niel, D'Angelo, & Raposo, 2018). EVs are structures with a lipid bilayer membrane which can further be categorised as exosomes or microvesicles (MVs) 30 depending on their origin. Exosomes are formed when multivesicular endosomes (MVEs) fuse with the plasma membrane and release intraluminal vesicles (ILVs) from the cell, while MVs are formed in a separate process via budding of the plasma membrane (Figure 2-6A-B). EVs have been shown to carry a wide range of cargo depending on conditions and cell type, including proteins, nucleic acids and lipids, with their composition directly influencing their fate and function thus highlighting their capacity for specific cell targeting and communication. This is achieved through a multitude of methods including surface binding of EVs to initiate signalling, fusion of EVs to the membrane for release of vesicle contents, and complete internalisation of EVs by the cell (Figure 2-6C). Figure 2-6 Summary of extracellular vesicle (EV) formation and signalling. EVs may be categorised as exosomes or microvesicles (MVs) (A). Exosomes are formed by the release of release of intraluminal vesicles contained within multivesicular endosomes, while microvesicles are formed via budding of the plasma membrane (B). These EVs can carry signals to a recipient cell, where they can initiate a response via surface binding, release of vesicle contents, or complete internalisation and further processing of EV contents (C). Adapted from (van Niel et al., 2018). 31 2.4.2 EVs in bone There are a range of studies highlighting the importance of EVs in bone in particular; with these primarily investigating osteoblast released EVs and their role in signalling with other cell types. Osteoblast EVs have been well characterised via proteomic analyses (J. Morhayim et al., 2015; Thouverey et al., 2011), with these studies providing novel insights into in contents of osteoblast EVs and their likely release mechanism from apical microvilli. One study investigated the use of RANKL by osteoblast EVs as a signalling mechanism to communicate with osteoclast precursors (L. Deng et al., 2015), where they were found to transfer RANKL to osteoclast precursor cells thus stimulating osteoclast formation. It was also found that these EVs interact with cells in a highly specific manner indicating targeted signalling, where they would bind to RANK-expressing- NIH3T3 fibroblasts, however in NIH3T3 fibroblasts they were transferred to the cytosol for possible degradation within lysosomes or dismissed via transcytosis. One interesting study investigated the role of osteoblast EVs in signalling and differentiation of MSCs (Davies et al., 2017a). In this study, the osteogenic differentiation of MSCs cultured with osteoblast EVs was investigated and compared to treatment of MSCs with BMP2. ALP levels were found to be comparable in cells treated with EVs and BMP2, however even more remarkably, calcium deposition was significantly enhanced with EV treatment compared to BMP2. The authors then carried out a proteomic analysis on the EVs to further investigate the mechanisms behind these results, where a great number of proteins involved in calcium binding, osteogenesis and collagen modification were identified. One group of proteins of particular interest which was identified were annexins, due to their interaction with phospholipids to form Ca2+ complexes, which act as centres for crystallisation and nucleation, thus initiating localised mineralisation at EVs. Recently, work on EVs released by osteocytes has also emerged, with one such study investigating miRNA expression in EVs isolated from the plasma of osteocyte 32 ablated mice and wild-type mice, where altered miRNA levels suggest a role for osteocytes in systemic EV signalling (Mari Sato, Suzuki, Kawano, & Tamura, 2017). Another study investigated the influence of unidirectional fluid flow stimulation on osteocyte EV release (Morrell et al., 2018). Mechanical stimulation was not found to influence EV size, however, an upregulation in particle concentration was demonstrated. This increased EV production with flow was blunted when cells were treated with neomycin, an inhibitor of Ca2+ signalling, indicating the role of this mechanosensitive signalling pathway in EV release. This was further demonstrated in vivo, where Lysosomal-associated membrane protein 1 (LAMP1), a secretory vesicle marker, was upregulated in loaded mice tibia and attenuated in neomycin treated mice. More broadly, another study investigated the role of exercise in regulating systemic EV release (Whitham et al., 2018), with over 300 proteins upregulated, suggesting an EV based means by which osteocytes may communicate systemically to other cells following mechanical stimulation. Due to the involvement and specificity of EVs in cell signalling, several researchers are beginning to investigate the use of EVs for therapeutic purposes. EVs have been isolated from human dental pulp stem cells (DPSCs), and can be up taken by hMSCs and undifferentiated primary DPSCs, resulting in significantly enhanced differentiation as seen by enhanced BMP2 gene expression (C.-C. Huang, Narayanan, Alapati, & Ravindran, 2016). In this study, EVs were also added to collagen membranes in human root tooth slices and implanted subcutaneously in mice, where they were seen to promote vascularisation and dental pulp-like tissue regeneration. In another study, osteoclast EV interaction with osteoblasts was investigated, with EVs being enriched with a specific miRNA (miR-214), which are taken up by osteoblasts, inhibiting their activity (Weijia Sun et al., 2016). This miRNA was found to be elevated in an osteoporotic mouse model as well as osteoporotic patients further revealing its likely role in the regulation of osteoblast behaviour and as a potential EV based target for osteoporosis therapies. The researchers further demonstrated 33 this by inhibiting EV release via systemic treatment with Rab27a siRNA, which was shown to promote osteoblast activity. Work is also ongoing into the loading of EVs with drugs for specific therapeutic delivery. In one such paper, two different anti-osteoclast drugs, dasatinib and the clinically approved zoledronate for osteoporosis treatment, were internalised within osteoblast EVs (Cappariello et al., 2017). Acute osteoclast over activation was initiated in mice, after which they were treated with free drugs, as well as drugs loaded within EVs. Drugs loaded within EVs were shown to be just as effective as free drugs in inhibiting osteoclast activity and inducing apoptosis, both in vitro and in vivo. EVs, either unmodified or loaded with drugs, are thus highly attractive biological tools for the development of effective cell-free therapeutics with targeted delivery. Due to the regenerative and therapeutic potential of EVs, their use for the functionalisation of tissue engineering scaffolds has recently been investigated. In a paper by Xie et al., EVs were isolated from MSCs and used to functionalise decalcified bone matrix scaffolds, which were subsequently implanted subcutaneously in mice to assess their angiogenic and regenerative potential (H. Xie et al., 2017b). After 1 and 2 months, bone volume did not change with EV treatment, however, scaffolds functionalised with both EVs and cells displayed significantly enhanced bone formation, demonstrating their synergistic effect in bone tissue regeneration. Remarkably, blood vessel formation with EV functionalised scaffolds was not only significantly greater than control scaffolds, but also just as effective as cell seeded scaffolds, while scaffolds with a combination of EVs and cells resulted in even greater vessel formation. Another study modified 3D printed scaffolds with EVs and implanted them in rat calvarial defects to investigate their capacity for bone repair (Diomede et al., 2018). Polyethy